Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LTAP01374 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LTAP01374 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.28■□□□□ 0.04
LTAP01374 IGHV3-19-201ENST00000521488 291 ntBASIC15.28■□□□□ 0.04
LTAP01374 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.28■□□□□ 0.04
LTAP01374 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.28■□□□□ 0.04
LTAP01374 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.28■□□□□ 0.04
LTAP01374 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.28■□□□□ 0.04
LTAP01374 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LTAP01374 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LTAP01374 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LTAP01374 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LTAP01374 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.27■□□□□ 0.04
LTAP01374 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LTAP01374 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LTAP01374 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.27■□□□□ 0.03
LTAP01374 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LTAP01374 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LTAP01374 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.27■□□□□ 0.03
LTAP01374 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.27■□□□□ 0.03
LTAP01374 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LTAP01374 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 AC093484.2-201ENST00000580996 2166 ntBASIC15.26■□□□□ 0.03
LTAP01374 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.26■□□□□ 0.03
LTAP01374 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LTAP01374 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.26■□□□□ 0.03
LTAP01374 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.26■□□□□ 0.03
LTAP01374 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 AL691432.2-201ENST00000607222 2038 ntBASIC15.26■□□□□ 0.03
LTAP01374 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.26■□□□□ 0.03
LTAP01374 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LTAP01374 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LTAP01374 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.25■□□□□ 0.03
LTAP01374 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LTAP01374 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.25■□□□□ 0.03
LTAP01374 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms