Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX4O95219 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX4O95219 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX4O95219 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX4O95219 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
SNX4O95219 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX4O95219 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SNX4O95219 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX4O95219 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX4O95219 AC133552.2-202ENST00000575694 574 ntBASIC19.01■□□□□ 0.63
SNX4O95219 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX4O95219 AC069236.1-201ENST00000604339 616 ntBASIC19.01■□□□□ 0.63
SNX4O95219 AL121832.2-201ENST00000610979 668 ntBASIC19.01■□□□□ 0.63
SNX4O95219 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX4O95219 AC008694.1-202ENST00000636953 945 ntBASIC19.01■□□□□ 0.63
SNX4O95219 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX4O95219 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SNX4O95219 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19■□□□□ 0.63
SNX4O95219 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19■□□□□ 0.63
SNX4O95219 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX4O95219 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19■□□□□ 0.63
SNX4O95219 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 GPX1P1-201ENST00000388829 606 ntBASIC19■□□□□ 0.63
SNX4O95219 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SNX4O95219 APTR-203ENST00000430801 583 ntTSL 5 BASIC19■□□□□ 0.63
SNX4O95219 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19■□□□□ 0.63
SNX4O95219 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19■□□□□ 0.63
SNX4O95219 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19■□□□□ 0.63
SNX4O95219 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX4O95219 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX4O95219 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX4O95219 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX4O95219 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNX4O95219 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.99■□□□□ 0.63
SNX4O95219 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.99■□□□□ 0.63
SNX4O95219 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.99■□□□□ 0.63
SNX4O95219 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.99■□□□□ 0.63
SNX4O95219 OR10C1-204ENST00000622521 1039 ntBASIC18.99■□□□□ 0.63
SNX4O95219 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNX4O95219 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNX4O95219 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNX4O95219 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SNX4O95219 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX4O95219 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX4O95219 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SNX4O95219 CDV3P1-201ENST00000471403 739 ntBASIC18.98■□□□□ 0.63
SNX4O95219 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX4O95219 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 AL050303.2-201ENST00000619798 666 ntBASIC18.98■□□□□ 0.63
SNX4O95219 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.98■□□□□ 0.63
SNX4O95219 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX4O95219 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SNX4O95219 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.98■□□□□ 0.63
SNX4O95219 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNX4O95219 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX4O95219 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX4O95219 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SNX4O95219 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX4O95219 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX4O95219 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNX4O95219 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX4O95219 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.97■□□□□ 0.63
SNX4O95219 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SNX4O95219 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SNX4O95219 AC091799.1-201ENST00000422823 811 ntBASIC18.97■□□□□ 0.63
SNX4O95219 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.97■□□□□ 0.63
SNX4O95219 CYP2T1P-201ENST00000432607 1285 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms