Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SUPT3HO75486 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.07■□□□□ 0.8
SUPT3HO75486 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.07■□□□□ 0.8
SUPT3HO75486 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.07■□□□□ 0.8
SUPT3HO75486 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SUPT3HO75486 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SUPT3HO75486 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SUPT3HO75486 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SUPT3HO75486 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 KRT19P1-201ENST00000405746 1186 ntBASIC20.06■□□□□ 0.8
SUPT3HO75486 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SUPT3HO75486 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SUPT3HO75486 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.06■□□□□ 0.8
SUPT3HO75486 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.05■□□□□ 0.8
SUPT3HO75486 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SUPT3HO75486 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 RBM17P2-201ENST00000616397 1405 ntBASIC20.05■□□□□ 0.8
SUPT3HO75486 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SUPT3HO75486 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.05■□□□□ 0.8
SUPT3HO75486 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.05■□□□□ 0.8
SUPT3HO75486 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.05■□□□□ 0.8
SUPT3HO75486 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.05■□□□□ 0.8
SUPT3HO75486 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.05■□□□□ 0.8
SUPT3HO75486 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SUPT3HO75486 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.05■□□□□ 0.8
SUPT3HO75486 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.05■□□□□ 0.8
SUPT3HO75486 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.04■□□□□ 0.8
SUPT3HO75486 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SUPT3HO75486 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.04■□□□□ 0.8
SUPT3HO75486 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.04■□□□□ 0.8
SUPT3HO75486 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 KRT18P61-201ENST00000585825 1298 ntBASIC20.04■□□□□ 0.8
SUPT3HO75486 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
SUPT3HO75486 MIR2861-201ENST00000636310 90 ntBASIC20.04■□□□□ 0.8
SUPT3HO75486 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SUPT3HO75486 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
SUPT3HO75486 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SUPT3HO75486 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SUPT3HO75486 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 AC019069.1-201ENST00000610008 1333 ntBASIC20.03■□□□□ 0.8
SUPT3HO75486 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.03■□□□□ 0.8
SUPT3HO75486 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SUPT3HO75486 AC091799.1-201ENST00000422823 811 ntBASIC20.03■□□□□ 0.8
SUPT3HO75486 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.03■□□□□ 0.8
SUPT3HO75486 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SUPT3HO75486 AC243732.1-201ENST00000612648 864 ntBASIC20.03■□□□□ 0.8
SUPT3HO75486 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SUPT3HO75486 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SUPT3HO75486 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SUPT3HO75486 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SUPT3HO75486 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SUPT3HO75486 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.03■□□□□ 0.8
SUPT3HO75486 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms