Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.95■□□□□ 0.94
TSPAN3O60637 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.95■□□□□ 0.94
TSPAN3O60637 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN3O60637 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TSPAN3O60637 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN3O60637 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TSPAN3O60637 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TSPAN3O60637 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
TSPAN3O60637 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TSPAN3O60637 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.94■□□□□ 0.94
TSPAN3O60637 AC006058.3-201ENST00000606217 1069 ntBASIC20.94■□□□□ 0.94
TSPAN3O60637 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN3O60637 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TSPAN3O60637 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN3O60637 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TSPAN3O60637 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN3O60637 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TSPAN3O60637 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN3O60637 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.93■□□□□ 0.94
TSPAN3O60637 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN3O60637 AC026366.1-201ENST00000488803 879 ntBASIC20.93■□□□□ 0.94
TSPAN3O60637 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 AP003097.1-201ENST00000530657 1135 ntBASIC20.93■□□□□ 0.94
TSPAN3O60637 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN3O60637 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.93■□□□□ 0.94
TSPAN3O60637 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 ITM2C-210ENST00000620962 501 ntBASIC20.93■□□□□ 0.94
TSPAN3O60637 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN3O60637 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN3O60637 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN3O60637 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 KRT8P36-201ENST00000489121 1440 ntBASIC20.93■□□□□ 0.94
TSPAN3O60637 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN3O60637 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN3O60637 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TSPAN3O60637 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN3O60637 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TSPAN3O60637 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TSPAN3O60637 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN3O60637 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.91■□□□□ 0.94
TSPAN3O60637 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.91■□□□□ 0.94
TSPAN3O60637 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.91■□□□□ 0.94
TSPAN3O60637 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
TSPAN3O60637 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.91■□□□□ 0.94
TSPAN3O60637 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.91■□□□□ 0.94
TSPAN3O60637 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.91■□□□□ 0.94
TSPAN3O60637 SOX15-203ENST00000570788 1093 ntBASIC20.91■□□□□ 0.94
TSPAN3O60637 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.91■□□□□ 0.94
TSPAN3O60637 FP700111.2-201ENST00000619190 1892 ntBASIC20.91■□□□□ 0.94
TSPAN3O60637 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TSPAN3O60637 AL121603.2-201ENST00000557373 2117 ntBASIC20.9■□□□□ 0.94
TSPAN3O60637 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.9■□□□□ 0.94
TSPAN3O60637 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TSPAN3O60637 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms