Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CYP2D8P-201ENST00000433633 1490 ntBASIC19.18■□□□□ 0.66
URB1O60287 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 FAM197Y1-201ENST00000421178 764 ntBASIC19.18■□□□□ 0.66
URB1O60287 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.18■□□□□ 0.66
URB1O60287 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.18■□□□□ 0.66
URB1O60287 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.18■□□□□ 0.66
URB1O60287 AL121894.2-201ENST00000602977 491 ntBASIC19.18■□□□□ 0.66
URB1O60287 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
URB1O60287 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 AC087633.2-202ENST00000565166 1439 ntBASIC19.18■□□□□ 0.66
URB1O60287 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 KRT126P-201ENST00000549467 1181 ntBASIC19.18■□□□□ 0.66
URB1O60287 AC087388.1-201ENST00000571370 1112 ntBASIC19.18■□□□□ 0.66
URB1O60287 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.18■□□□□ 0.66
URB1O60287 REXO1L10P-201ENST00000615707 1290 ntBASIC19.18■□□□□ 0.66
URB1O60287 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
URB1O60287 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
URB1O60287 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
URB1O60287 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.17■□□□□ 0.66
URB1O60287 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.17■□□□□ 0.66
URB1O60287 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 SLC25A3P1-201ENST00000443844 931 ntBASIC19.17■□□□□ 0.66
URB1O60287 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
URB1O60287 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
URB1O60287 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.16■□□□□ 0.66
URB1O60287 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.16■□□□□ 0.66
URB1O60287 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 HTR7P1-201ENST00000538670 1336 ntBASIC19.16■□□□□ 0.66
URB1O60287 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.16■□□□□ 0.66
URB1O60287 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 UNC93B2-201ENST00000285383 730 ntBASIC19.16■□□□□ 0.66
URB1O60287 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
URB1O60287 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.16■□□□□ 0.66
URB1O60287 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.16■□□□□ 0.66
URB1O60287 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.15■□□□□ 0.66
URB1O60287 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
URB1O60287 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
URB1O60287 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 CYP21A1P-202ENST00000354927 1481 ntBASIC19.15■□□□□ 0.66
URB1O60287 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
URB1O60287 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.15■□□□□ 0.66
URB1O60287 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
URB1O60287 AC010947.1-201ENST00000623454 693 ntBASIC19.15■□□□□ 0.66
URB1O60287 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.15■□□□□ 0.66
URB1O60287 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.15■□□□□ 0.66
URB1O60287 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms