Protein–RNA interactions for Protein: O43861

ATP9B, Probable phospholipid-transporting ATPase IIB, humanhuman

Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9BO43861 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP9BO43861 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ATP9BO43861 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ATP9BO43861 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP9BO43861 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP9BO43861 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ATP9BO43861 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP9BO43861 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP9BO43861 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP9BO43861 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP9BO43861 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ATP9BO43861 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP9BO43861 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP9BO43861 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ATP9BO43861 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ATP9BO43861 AC116050.2-201ENST00000612102 1779 ntBASIC20.97■□□□□ 0.95
ATP9BO43861 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP9BO43861 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP9BO43861 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP9BO43861 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP9BO43861 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP9BO43861 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP9BO43861 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP9BO43861 KRT18P6-201ENST00000555540 1265 ntBASIC20.97■□□□□ 0.95
ATP9BO43861 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP9BO43861 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP9BO43861 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
ATP9BO43861 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATP9BO43861 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP9BO43861 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
ATP9BO43861 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP9BO43861 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP9BO43861 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP9BO43861 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP9BO43861 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP9BO43861 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP9BO43861 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.96■□□□□ 0.95
ATP9BO43861 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP9BO43861 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP9BO43861 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
ATP9BO43861 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP9BO43861 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 MCRIP2P1-201ENST00000394346 511 ntBASIC20.95■□□□□ 0.94
ATP9BO43861 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP9BO43861 CYP2T3P-201ENST00000601990 817 ntBASIC20.95■□□□□ 0.94
ATP9BO43861 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP9BO43861 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP9BO43861 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP9BO43861 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms