Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.32■□□□□ 0.36
SSNA1O43805 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSNA1O43805 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.32■□□□□ 0.36
SSNA1O43805 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSNA1O43805 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSNA1O43805 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
SSNA1O43805 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSNA1O43805 OR6D1P-202ENST00000641007 5290 ntBASIC17.32■□□□□ 0.36
SSNA1O43805 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSNA1O43805 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
SSNA1O43805 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSNA1O43805 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.31■□□□□ 0.36
SSNA1O43805 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.31■□□□□ 0.36
SSNA1O43805 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSNA1O43805 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.31■□□□□ 0.36
SSNA1O43805 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.31■□□□□ 0.36
SSNA1O43805 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
SSNA1O43805 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.31■□□□□ 0.36
SSNA1O43805 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.31■□□□□ 0.36
SSNA1O43805 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSNA1O43805 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 AC007613.1-201ENST00000572811 2597 ntBASIC17.3■□□□□ 0.36
SSNA1O43805 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SSNA1O43805 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.3■□□□□ 0.36
SSNA1O43805 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.3■□□□□ 0.36
SSNA1O43805 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSNA1O43805 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SSNA1O43805 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSNA1O43805 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SSNA1O43805 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
SSNA1O43805 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.29■□□□□ 0.36
SSNA1O43805 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
SSNA1O43805 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSNA1O43805 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.28■□□□□ 0.36
SSNA1O43805 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
SSNA1O43805 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSNA1O43805 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.28■□□□□ 0.36
SSNA1O43805 AL499627.2-201ENST00000606283 725 ntBASIC17.28■□□□□ 0.36
SSNA1O43805 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms