Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.47□□□□□ -0.09
PAX4O43316 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 AC006128.1-201ENST00000624704 1661 ntBASIC14.47□□□□□ -0.09
PAX4O43316 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PAX4O43316 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PAX4O43316 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 AC231657.2-201ENST00000624556 255 ntBASIC14.47□□□□□ -0.09
PAX4O43316 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.47□□□□□ -0.09
PAX4O43316 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PAX4O43316 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
PAX4O43316 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
PAX4O43316 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PAX4O43316 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.47□□□□□ -0.09
PAX4O43316 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PAX4O43316 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
PAX4O43316 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 PLK5-205ENST00000642079 1969 ntBASIC14.46□□□□□ -0.09
PAX4O43316 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.46□□□□□ -0.09
PAX4O43316 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.46□□□□□ -0.09
PAX4O43316 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.46□□□□□ -0.09
PAX4O43316 AC007322.1-201ENST00000426983 750 ntBASIC14.46□□□□□ -0.09
PAX4O43316 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.46□□□□□ -0.09
PAX4O43316 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.46□□□□□ -0.09
PAX4O43316 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 DUX4L16-201ENST00000555130 1264 ntBASIC14.46□□□□□ -0.09
PAX4O43316 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.46□□□□□ -0.09
PAX4O43316 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.46□□□□□ -0.09
PAX4O43316 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.46□□□□□ -0.09
PAX4O43316 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PAX4O43316 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.46□□□□□ -0.09
PAX4O43316 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PAX4O43316 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PAX4O43316 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PAX4O43316 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.45□□□□□ -0.1
PAX4O43316 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PAX4O43316 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.45□□□□□ -0.1
PAX4O43316 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PAX4O43316 AC007322.4-201ENST00000509611 723 ntBASIC14.45□□□□□ -0.1
PAX4O43316 AC080038.1-201ENST00000611274 1154 ntBASIC14.45□□□□□ -0.1
PAX4O43316 AC092666.2-201ENST00000613287 246 ntBASIC14.45□□□□□ -0.1
PAX4O43316 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.45□□□□□ -0.1
PAX4O43316 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
PAX4O43316 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.45□□□□□ -0.1
PAX4O43316 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PAX4O43316 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms