Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A1O00337 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A1O00337 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC28A1O00337 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SLC28A1O00337 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A1O00337 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC28A1O00337 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SLC28A1O00337 TCF3P1-201ENST00000423021 1937 ntBASIC19.55■□□□□ 0.72
SLC28A1O00337 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC28A1O00337 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 SMG8-203ENST00000578922 2178 ntBASIC19.54■□□□□ 0.72
SLC28A1O00337 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
SLC28A1O00337 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC28A1O00337 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC28A1O00337 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC28A1O00337 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A1O00337 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A1O00337 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SLC28A1O00337 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A1O00337 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A1O00337 AFG3L1P-217ENST00000557444 2447 ntBASIC19.53■□□□□ 0.72
SLC28A1O00337 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC28A1O00337 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC28A1O00337 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 ZNRF2P3-201ENST00000424200 374 ntBASIC19.53■□□□□ 0.72
SLC28A1O00337 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SLC28A1O00337 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A1O00337 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A1O00337 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC28A1O00337 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SLC28A1O00337 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC28A1O00337 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC28A1O00337 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SLC28A1O00337 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A1O00337 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC28A1O00337 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.52■□□□□ 0.72
SLC28A1O00337 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A1O00337 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A1O00337 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A1O00337 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC28A1O00337 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SLC28A1O00337 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SLC28A1O00337 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC28A1O00337 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC28A1O00337 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SLC28A1O00337 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC28A1O00337 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC28A1O00337 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC28A1O00337 AC097381.1-201ENST00000429019 1296 ntBASIC19.51■□□□□ 0.71
SLC28A1O00337 UBE2DNL-204ENST00000602536 740 ntBASIC19.51■□□□□ 0.71
SLC28A1O00337 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms