Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3FO00303 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3FO00303 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.88■□□□□ 0.77
EIF3FO00303 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.88■□□□□ 0.77
EIF3FO00303 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3FO00303 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EIF3FO00303 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.88■□□□□ 0.77
EIF3FO00303 AC004911.1-201ENST00000416316 871 ntBASIC19.88■□□□□ 0.77
EIF3FO00303 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
EIF3FO00303 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
EIF3FO00303 CYP2T3P-201ENST00000601990 817 ntBASIC19.88■□□□□ 0.77
EIF3FO00303 AC105020.6-201ENST00000621523 1217 ntBASIC19.88■□□□□ 0.77
EIF3FO00303 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EIF3FO00303 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
EIF3FO00303 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3FO00303 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3FO00303 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.87■□□□□ 0.77
EIF3FO00303 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3FO00303 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 KRT18P68-201ENST00000392293 1000 ntBASIC19.87■□□□□ 0.77
EIF3FO00303 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.87■□□□□ 0.77
EIF3FO00303 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
EIF3FO00303 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
EIF3FO00303 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
EIF3FO00303 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EIF3FO00303 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 CDCA4P2-201ENST00000441182 718 ntBASIC19.86■□□□□ 0.77
EIF3FO00303 AC026185.1-201ENST00000445748 174 ntBASIC19.86■□□□□ 0.77
EIF3FO00303 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 RAP2CP1-201ENST00000605103 478 ntBASIC19.86■□□□□ 0.77
EIF3FO00303 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EIF3FO00303 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
EIF3FO00303 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EIF3FO00303 AC010980.2-201ENST00000587099 1412 ntBASIC19.85■□□□□ 0.77
EIF3FO00303 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3FO00303 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3FO00303 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.85■□□□□ 0.77
EIF3FO00303 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3FO00303 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3FO00303 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 AL512408.1-201ENST00000569378 2000 ntBASIC19.85■□□□□ 0.77
EIF3FO00303 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.85■□□□□ 0.77
EIF3FO00303 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EIF3FO00303 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
EIF3FO00303 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
EIF3FO00303 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3FO00303 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
EIF3FO00303 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EIF3FO00303 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms