Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 KRT17P1-201ENST00000399211 1546 ntBASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.91■□□□□ 0.78
TMX2-CTNND1H3BSU7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 KRT18P68-201ENST00000392293 1000 ntBASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 AL355472.2-201ENST00000422958 438 ntBASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TMX2-CTNND1H3BSU7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TMX2-CTNND1H3BSU7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMX2-CTNND1H3BSU7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TMX2-CTNND1H3BSU7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 UNC93B4-201ENST00000505679 747 ntBASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMX2-CTNND1H3BSU7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC007322.3-201ENST00000426526 701 ntBASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.88■□□□□ 0.77
TMX2-CTNND1H3BSU7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 KRT17P3-201ENST00000420566 1262 ntBASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.87■□□□□ 0.77
TMX2-CTNND1H3BSU7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TMX2-CTNND1H3BSU7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms