Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.23■□□□□ 0.99
YJEFN3A6XGL0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
YJEFN3A6XGL0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
YJEFN3A6XGL0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.2■□□□□ 0.99
YJEFN3A6XGL0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.99
YJEFN3A6XGL0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YJEFN3A6XGL0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 RNA5SP413-201ENST00000516373 109 ntBASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 CD99P1-205ENST00000527459 561 ntBASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
YJEFN3A6XGL0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.18■□□□□ 0.98
YJEFN3A6XGL0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
YJEFN3A6XGL0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
YJEFN3A6XGL0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
YJEFN3A6XGL0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
YJEFN3A6XGL0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.17■□□□□ 0.98
YJEFN3A6XGL0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms