Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM49BA6NDI0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 CDV3P1-201ENST00000471403 739 ntBASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
TRIM49BA6NDI0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM49BA6NDI0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 RARRES2P6-201ENST00000567333 442 ntBASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TRIM49BA6NDI0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 AC137761.2-201ENST00000561729 223 ntBASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 AC145350.3-201ENST00000569033 163 ntBASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 MFSD11-216ENST00000590393 1141 ntBASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 AC016405.3-201ENST00000607710 860 ntBASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 DPP3P2-201ENST00000416030 1696 ntBASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM49BA6NDI0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM49BA6NDI0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 FAM21FP-204ENST00000608637 956 ntBASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRIM49BA6NDI0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRIM49BA6NDI0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms