Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.57■□□□□ 0.72
CNOT1A5YKK6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 NAPSB-206ENST00000562112 1266 ntBASIC19.57■□□□□ 0.72
CNOT1A5YKK6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.57■□□□□ 0.72
CNOT1A5YKK6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 AC004264.1-201ENST00000608354 794 ntBASIC19.56■□□□□ 0.72
CNOT1A5YKK6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 HCG4P8-203ENST00000443049 980 ntBASIC19.56■□□□□ 0.72
CNOT1A5YKK6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.56■□□□□ 0.72
CNOT1A5YKK6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 AL356652.1-201ENST00000615962 565 ntBASIC19.55■□□□□ 0.72
CNOT1A5YKK6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.55■□□□□ 0.72
CNOT1A5YKK6 LIN28AP1-201ENST00000429574 405 ntBASIC19.55■□□□□ 0.72
CNOT1A5YKK6 KSR1P1-201ENST00000446298 240 ntBASIC19.55■□□□□ 0.72
CNOT1A5YKK6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.55■□□□□ 0.72
CNOT1A5YKK6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.54■□□□□ 0.72
CNOT1A5YKK6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.54■□□□□ 0.72
CNOT1A5YKK6 BX664615.1-201ENST00000443558 458 ntBASIC19.54■□□□□ 0.72
CNOT1A5YKK6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 AC116407.4-201ENST00000623319 1061 ntBASIC19.53■□□□□ 0.72
CNOT1A5YKK6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNOT1A5YKK6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.52■□□□□ 0.72
CNOT1A5YKK6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms