Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF103-CHMP3A0A140T963 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF103-CHMP3A0A140T963 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF103-CHMP3A0A140T963 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF103-CHMP3A0A140T963 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF103-CHMP3A0A140T963 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 MIR638-201ENST00000385237 100 ntBASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 AC008175.2-201ENST00000612840 297 ntBASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF103-CHMP3A0A140T963 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
RNF103-CHMP3A0A140T963 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 POU5F1P4-201ENST00000413175 1085 ntBASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF103-CHMP3A0A140T963 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF103-CHMP3A0A140T963 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF103-CHMP3A0A140T963 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms