Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AP000974.1-201ENST00000623909 2387 ntBASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 AC005332.7-201ENST00000614046 2005 ntBASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 KRT16P2-201ENST00000414673 1423 ntBASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRBV27A0A0K0K1C4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 TNXA-203ENST00000507684 2038 ntBASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRBV27A0A0K0K1C4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 TSPY26P-201ENST00000476365 1326 ntBASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRBV27A0A0K0K1C4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV27A0A0K0K1C4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms