Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 KRT16P3-201ENST00000439127 1283 ntBASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SRD5A1P1-201ENST00000442297 786 ntBASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 AP005435.1-201ENST00000529293 1178 ntBASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 AL356740.2-201ENST00000601559 647 ntBASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV34A0A0B4J273 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 AC092171.4-201ENST00000609130 632 ntBASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV34A0A0B4J273 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 SLC47A1P1-202ENST00000449666 945 ntBASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV34A0A0B4J273 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV34A0A0B4J273 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV34A0A0B4J273 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms