Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRAV6A0A075B6T7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV6A0A075B6T7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV6A0A075B6T7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 AC092720.2-201ENST00000602388 1665 ntBASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 AL451085.2-201ENST00000605085 799 ntBASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 AC087239.1-201ENST00000622671 572 ntBASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV6A0A075B6T7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 AC093484.2-201ENST00000580996 2166 ntBASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 AC068587.7-201ENST00000641602 218 ntBASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 FZD10-202ENST00000539839 3282 ntBASIC17.38■□□□□ 0.37
TRAV6A0A075B6T7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 AC133637.1-201ENST00000624115 1537 ntBASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV6A0A075B6T7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV6A0A075B6T7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV6A0A075B6T7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV6A0A075B6T7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV6A0A075B6T7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms