Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 SSH2-209ENST00000579954 428 ntTSL 3 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 SNORD91A-202ENST00000609620 191 ntBASIC7.79□□□□□ -1.16
SNX18Q96RF0 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 GLULP5-201ENST00000547831 1390 ntBASIC7.79□□□□□ -1.16
SNX18Q96RF0 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 TTC3P1-201ENST00000399586 6081 ntBASIC7.79□□□□□ -1.16
SNX18Q96RF0 AL138831.3-201ENST00000623656 1458 ntBASIC7.79□□□□□ -1.16
SNX18Q96RF0 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.79□□□□□ -1.16
SNX18Q96RF0 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNX18Q96RF0 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 RN7SKP72-201ENST00000362327 292 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 SNORA55-201ENST00000364587 135 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 AL024509.1-201ENST00000397093 927 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 GCNT1P1-201ENST00000416567 1295 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 E2F4P1-201ENST00000422443 1133 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 SNX18P2-201ENST00000438540 808 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 RN7SL305P-201ENST00000464862 281 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 RN7SL318P-201ENST00000471955 297 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 RPL12P42-201ENST00000481802 499 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC093270.1-201ENST00000482584 486 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC097522.1-201ENST00000507811 1042 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 ENPP7P1-201ENST00000509557 999 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 IGHVIII-51-1-201ENST00000519403 302 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 RPS3-207ENST00000526608 710 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC087863.1-201ENST00000544515 570 ntTSL 4 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 SLC25A3P2-201ENST00000547720 880 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 AC006557.4-201ENST00000585516 830 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 C5orf58-206ENST00000593851 509 ntAPPRIS P5 TSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 HLA-B-258ENST00000640615 240 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 DBIL5P2-202ENST00000491724 1692 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC7.78□□□□□ -1.16
SNX18Q96RF0 OR6M2P-202ENST00000641780 2063 ntBASIC7.78□□□□□ -1.16
SNX18Q96RF0 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNX18Q96RF0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
SNX18Q96RF0 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.16
SNX18Q96RF0 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
SNX18Q96RF0 MAPK10-371ENST00000641952 5209 ntBASIC7.77□□□□□ -1.16
SNX18Q96RF0 MAPK10-281ENST00000641170 3070 ntBASIC7.77□□□□□ -1.16
SNX18Q96RF0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNX18Q96RF0 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms