Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC009997.1-201ENST00000557862 129 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 KDM5DP1-201ENST00000622542 298 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 OGDH-210ENST00000631326 4116 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 CDY15P-201ENST00000421995 1570 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 CDY22P-201ENST00000451423 1554 ntBASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPIPA3F8WFD2 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPIPA3F8WFD2 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPIPA3F8WFD2 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPIPA3F8WFD2 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 RNA5SP336-201ENST00000364189 117 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 SNORA14B-201ENST00000384452 135 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 ANXA2P3-201ENST00000404883 1008 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 PHBP7-201ENST00000415677 814 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 GUSBP4-201ENST00000423899 672 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 RPL3P8-201ENST00000432928 1191 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL669831.5-219ENST00000443772 417 ntTSL 3 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 RN7SL841P-201ENST00000470547 297 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 CASP12-211ENST00000508062 774 ntTSL 5 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC091175.1-201ENST00000522168 572 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 MPPE1P1-201ENST00000557286 1076 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL136304.1-201ENST00000607790 509 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC093458.1-201ENST00000608912 222 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL731556.2-201ENST00000615610 770 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AP003072.3-201ENST00000623456 594 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC011483.4-201ENST00000623621 585 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC100756.3-201ENST00000618455 1816 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC110769.2-201ENST00000602760 1548 ntBASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPIPA3F8WFD2 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 RNA5SP221-201ENST00000411271 103 ntBASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AL049734.1-201ENST00000422384 608 ntBASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC024082.1-201ENST00000435250 699 ntBASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 MTND6P21-201ENST00000443620 482 ntBASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.76□□□□□ -1.17
NPIPA3F8WFD2 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms