Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ZFYVE9-205ENST00000469134 859 ntTSL 34.78□□□□□ -1.647e-9■■□□□ 13.5
PRPF8Q6P2Q9 ACVR2A-204ENST00000465329 993 ntTSL 24.74□□□□□ -1.657e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.23□□□□□ -1.732e-8■■□□□ 13.5
PRPF8Q6P2Q9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.73□□□□□ -1.817e-9■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-207ENST00000490934 712 ntTSL 32.99□□□□□ -1.937e-9■■□□□ 13.5
PRPF8Q6P2Q9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.947e-9■■□□□ 13.5
PRPF8Q6P2Q9 GGNBP2-218ENST00000620927 680 ntTSL 22.3□□□□□ -2.047e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZNF561-216ENST00000483768 579 ntTSL 1 (best)2.29□□□□□ -2.047e-9■■□□□ 13.5
PRPF8Q6P2Q9 ABCD3-206ENST00000493416 623 ntTSL 51.71□□□□□ -2.141e-7■■□□□ 13.5
PRPF8Q6P2Q9 CDC16-207ENST00000461716 700 ntTSL 51.15□□□□□ -2.237e-9■■□□□ 13.5
PRPF8Q6P2Q9 MIS12-205ENST00000576988 551 ntTSL 40.88□□□□□ -2.277e-9■■□□□ 13.5
PRPF8Q6P2Q9 ERICH1-210ENST00000523709 406 ntTSL 30.84□□□□□ -2.287e-9■■□□□ 13.5
PRPF8Q6P2Q9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.1■□□□□ 0.011e-10■■□□□ 13.5
PRPF8Q6P2Q9 CCT6P1-201ENST00000434500 1544 ntBASIC9.88□□□□□ -0.831e-10■■□□□ 13.5
PRPF8Q6P2Q9 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC9.68□□□□□ -0.861e-10■■□□□ 13.5
PRPF8Q6P2Q9 LRP5-205ENST00000529702 586 ntTSL 310.26□□□□□ -0.776e-17■■□□□ 13.5
PRPF8Q6P2Q9 IL32-224ENST00000534748 580 ntTSL 316.5■□□□□ 0.236e-8■■□□□ 13.5
PRPF8Q6P2Q9 SRRM2-215ENST00000573498 994 ntTSL 36.43□□□□□ -1.381e-24■■□□□ 13.5
PRPF8Q6P2Q9 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC9.51□□□□□ -0.893e-6■■□□□ 13.5
PRPF8Q6P2Q9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.63e-6■■□□□ 13.5
PRPF8Q6P2Q9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.49□□□□□ -1.693e-6■■□□□ 13.5
PRPF8Q6P2Q9 SSX3-203ENST00000376895 799 ntTSL 54.23□□□□□ -1.733e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGEF7-211ENST00000466143 1681 ntTSL 511□□□□□ -0.653e-6■■□□□ 13.5
PRPF8Q6P2Q9 ARHGEF7-213ENST00000469877 1501 ntTSL 29.83□□□□□ -0.843e-6■■□□□ 13.5
PRPF8Q6P2Q9 MBNL1-207ENST00000459747 594 ntTSL 412.97□□□□□ -0.336e-7■■□□□ 13.5
PRPF8Q6P2Q9 MBNL1-221ENST00000495875 545 ntTSL 26.55□□□□□ -1.366e-7■■□□□ 13.5
PRPF8Q6P2Q9 MBNL1-210ENST00000461436 1681 ntTSL 53.81□□□□□ -1.86e-7■■□□□ 13.5
PRPF8Q6P2Q9 TMEM183A-204ENST00000488097 555 ntTSL 57.2□□□□□ -1.261e-6■■□□□ 13.5
PRPF8Q6P2Q9 LTBP4-223ENST00000598717 811 ntTSL 515.7■□□□□ 0.16e-9■■□□□ 13.5
PRPF8Q6P2Q9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.096e-9■■□□□ 13.5
PRPF8Q6P2Q9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.096e-9■■□□□ 13.5
PRPF8Q6P2Q9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.096e-9■■□□□ 13.5
PRPF8Q6P2Q9 MORC3-202ENST00000484028 688 ntTSL 3-0.14□□□□□ -2.439e-9■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-209ENST00000578642 579 ntTSL 416.35■□□□□ 0.217e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-214ENST00000581418 580 ntTSL 215.55■□□□□ 0.087e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-221ENST00000583961 581 ntTSL 514.94□□□□□ -0.027e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-212ENST00000580716 567 ntTSL 414.68□□□□□ -0.067e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-216ENST00000582327 561 ntTSL 414.68□□□□□ -0.067e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-213ENST00000580723 594 ntTSL 414.43□□□□□ -0.17e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-207ENST00000578392 552 ntTSL 414.26□□□□□ -0.137e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-219ENST00000583641 795 ntTSL 212.57□□□□□ -0.47e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-211ENST00000580627 543 ntTSL 412.17□□□□□ -0.467e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-215ENST00000581578 470 ntTSL 410.94□□□□□ -0.667e-8■■□□□ 13.5
PRPF8Q6P2Q9 GPS1-220ENST00000583885 594 ntTSL 410.5□□□□□ -0.737e-8■■□□□ 13.5
PRPF8Q6P2Q9 GAK-213ENST00000510799 763 ntTSL 1 (best)12.16□□□□□ -0.463e-7■■□□□ 13.5
PRPF8Q6P2Q9 CKB-202ENST00000553528 1170 ntTSL 214.18□□□□□ -0.144e-7■■□□□ 13.5
PRPF8Q6P2Q9 AJUBA-205ENST00000553736 751 ntTSL 217.41■□□□□ 0.385e-45■■□□□ 13.5
PRPF8Q6P2Q9 SLC23A2-205ENST00000496331 761 ntTSL 313.57□□□□□ -0.245e-9■■□□□ 13.5
PRPF8Q6P2Q9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.95□□□□□ -0.188e-6■■□□□ 13.5
PRPF8Q6P2Q9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.66□□□□□ -0.061e-7■■□□□ 13.5
PRPF8Q6P2Q9 STK24-205ENST00000444574 1590 ntTSL 1 (best)11.53□□□□□ -0.561e-7■■□□□ 13.5
PRPF8Q6P2Q9 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.751e-7■■□□□ 13.5
PRPF8Q6P2Q9 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.821e-7■■□□□ 13.5
PRPF8Q6P2Q9 ACTG1-213ENST00000576214 1024 ntTSL 510.98□□□□□ -0.659e-11■■□□□ 13.5
PRPF8Q6P2Q9 PIM2-202ENST00000442430 892 ntTSL 210.69□□□□□ -0.72e-7■■□□□ 13.5
PRPF8Q6P2Q9 PPIF-204ENST00000492149 646 ntTSL 214.36□□□□□ -0.112e-7■■□□□ 13.5
PRPF8Q6P2Q9 NACA-217ENST00000551520 544 ntTSL 25.24□□□□□ -1.574e-16■■□□□ 13.5
PRPF8Q6P2Q9 NACA-214ENST00000550343 343 ntTSL 21□□□□□ -2.255e-8■■□□□ 13.5
PRPF8Q6P2Q9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.644e-7■■□□□ 13.5
PRPF8Q6P2Q9 CKB-204ENST00000553652 1239 ntTSL 514.67□□□□□ -0.064e-7■■□□□ 13.5
PRPF8Q6P2Q9 VAV2-205ENST00000486113 523 ntTSL 210.73□□□□□ -0.699e-13■■□□□ 13.5
PRPF8Q6P2Q9 BCAM-203ENST00000588603 904 ntTSL 215.69■□□□□ 0.16e-20■■□□□ 13.5
PRPF8Q6P2Q9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.32■□□□□ 0.843e-7■■□□□ 13.5
PRPF8Q6P2Q9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.82■□□□□ 0.63e-7■■□□□ 13.5
PRPF8Q6P2Q9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.27□□□□□ -0.453e-7■■□□□ 13.5
PRPF8Q6P2Q9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.543e-7■■□□□ 13.5
PRPF8Q6P2Q9 GABBR1-213ENST00000485508 825 ntTSL 518.82■□□□□ 0.65e-7■■□□□ 13.5
PRPF8Q6P2Q9 LAMB2-206ENST00000469665 1092 ntTSL 213.83□□□□□ -0.22e-7■■□□□ 13.5
PRPF8Q6P2Q9 GPR108-211ENST00000597706 1834 ntTSL 517.51■□□□□ 0.391e-6■■□□□ 13.5
PRPF8Q6P2Q9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.271e-6■■□□□ 13.5
PRPF8Q6P2Q9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.271e-6■■□□□ 13.5
PRPF8Q6P2Q9 GPR108-208ENST00000595908 1750 ntTSL 513.31□□□□□ -0.281e-6■■□□□ 13.5
PRPF8Q6P2Q9 AL590627.2-202ENST00000636318 138 ntTSL 510.33□□□□□ -0.764e-7■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.121e-6■■□□□ 13.5
PRPF8Q6P2Q9 GABBR1-220ENST00000494877 2364 ntTSL 513.32□□□□□ -0.284e-7■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-204ENST00000433381 1573 ntTSL 513.26□□□□□ -0.291e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-214ENST00000487632 2015 ntTSL 1 (best)12.54□□□□□ -0.41e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-211ENST00000476064 1643 ntTSL 512□□□□□ -0.491e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-206ENST00000448302 939 ntTSL 211.89□□□□□ -0.511e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-212ENST00000479512 1905 ntTSL 511.28□□□□□ -0.61e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-202ENST00000418825 1030 ntTSL 510.58□□□□□ -0.721e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-208ENST00000461020 2229 ntTSL 1 (best)10.56□□□□□ -0.721e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-203ENST00000429366 1364 ntTSL 1 (best)10.05□□□□□ -0.81e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-205ENST00000433999 1006 ntTSL 59.65□□□□□ -0.861e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-207ENST00000451194 1747 ntTSL 1 (best)9.46□□□□□ -0.91e-6■■□□□ 13.5
PRPF8Q6P2Q9 NPRL2-209ENST00000467294 3113 ntTSL 1 (best)9.24□□□□□ -0.931e-6■■□□□ 13.5
PRPF8Q6P2Q9 TMEM259-211ENST00000593068 1965 ntTSL 514.18□□□□□ -0.143e-8■■□□□ 13.5
PRPF8Q6P2Q9 EMD-205ENST00000471965 800 ntTSL 218.55■□□□□ 0.564e-6■■□□□ 13.5
PRPF8Q6P2Q9 GALE-215ENST00000486382 449 ntTSL 314.86□□□□□ -0.032e-7■■□□□ 13.4
PRPF8Q6P2Q9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.211e-10■■□□□ 13.4
PRPF8Q6P2Q9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.611e-10■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-212ENST00000476245 4604 ntTSL 1 (best)11.96□□□□□ -0.495e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC9.41□□□□□ -0.95e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC8.88□□□□□ -0.995e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-210ENST00000472186 3157 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.085e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-203ENST00000393434 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.085e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-201ENST00000273450 3179 ntTSL 1 (best) BASIC8.11□□□□□ -1.115e-8■■□□□ 13.4
PRPF8Q6P2Q9 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC7.78□□□□□ -1.165e-8■■□□□ 13.4
PRPF8Q6P2Q9 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC11.61□□□□□ -0.559e-7■■□□□ 13.4
PRPF8Q6P2Q9 STAT5A-203ENST00000468096 893 ntTSL 39.19□□□□□ -0.949e-7■■□□□ 13.4
Retrieved 100 of 73,762 protein–RNA pairs in 1558.5 ms