RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 AEBP2Q6ZN18 517 aaPredicted RBP15.4■□□□□ 0.06
ZNF561-216ENST00000483768 CHIC1Q5VXU3 224 aa14.7□□□□□ -0.06
ZNF561-216ENST00000483768 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
ZNF561-216ENST00000483768 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
ZNF561-216ENST00000483768 FOXD1Q16676 465 aa12.24□□□□□ -0.45
ZNF561-216ENST00000483768 PLPPR3Q6T4P5 718 aa11.79□□□□□ -0.52
ZNF561-216ENST00000483768 ADRA2BP18089 450 aa11.51□□□□□ -0.57
ZNF561-216ENST00000483768 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
ZNF561-216ENST00000483768 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
ZNF561-216ENST00000483768 MSH5O43196 834 aa11.41□□□□□ -0.58
ZNF561-216ENST00000483768 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
ZNF561-216ENST00000483768 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
ZNF561-216ENST00000483768 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
ZNF561-216ENST00000483768 DMRT2Q9Y5R5 561 aa10.41□□□□□ -0.74
ZNF561-216ENST00000483768 PPP4R3CPQ6ZMV5 832 aa10.37□□□□□ -0.75
ZNF561-216ENST00000483768 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
ZNF561-216ENST00000483768 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
ZNF561-216ENST00000483768 HOXD11P31277 338 aaPredicted RBP10.04□□□□□ -0.8
ZNF561-216ENST00000483768 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
ZNF561-216ENST00000483768 NCBP3Q53F19 620 aaKnown RBP10□□□□□ -0.81
ZNF561-216ENST00000483768 NPM3O75607 178 aaKnown RBP9.84□□□□□ -0.83
ZNF561-216ENST00000483768 CACNB1Q02641 598 aaPredicted RBP9.8□□□□□ -0.84
ZNF561-216ENST00000483768 KCNA4P22459 653 aa9.75□□□□□ -0.85
ZNF561-216ENST00000483768 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
ZNF561-216ENST00000483768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.65□□□□□ -0.86
ZNF561-216ENST00000483768 DNAJC5BQ9UF47 199 aa9.62□□□□□ -0.87
ZNF561-216ENST00000483768 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
ZNF561-216ENST00000483768 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
ZNF561-216ENST00000483768 SLC4A2P04920 1241 aa9.37□□□□□ -0.91
ZNF561-216ENST00000483768 CAPN15O75808 1086 aa9.29□□□□□ -0.92
ZNF561-216ENST00000483768 SPINK5Q9NQ38 1064 aaPredicted RBP9.28□□□□□ -0.92
ZNF561-216ENST00000483768 SLC4A1APQ9BWU0 796 aaKnown RBP9.23□□□□□ -0.93
ZNF561-216ENST00000483768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 TRHP20396 242 aaPredicted RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 APLP2Q06481 763 aa9.17□□□□□ -0.94
ZNF561-216ENST00000483768 HNRNPUL2Q1KMD3 747 aaKnown RBP9.17□□□□□ -0.94
ZNF561-216ENST00000483768 DSG3P32926 999 aa9.15□□□□□ -0.94
ZNF561-216ENST00000483768 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
ZNF561-216ENST00000483768 MYCNP04198 464 aaPredicted RBP9.1□□□□□ -0.95
ZNF561-216ENST00000483768 ABCB7O75027 752 aa9.09□□□□□ -0.95
ZNF561-216ENST00000483768 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
ZNF561-216ENST00000483768 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
ZNF561-216ENST00000483768 ZBTB22O15209 634 aa8.94□□□□□ -0.98
ZNF561-216ENST00000483768 POLA2Q14181 598 aa8.91□□□□□ -0.98
ZNF561-216ENST00000483768 ATF5Q9Y2D1 282 aaPredicted RBP8.9□□□□□ -0.98
ZNF561-216ENST00000483768 RBM42Q9BTD8 480 aaKnown RBP8.74□□□□□ -1.01
ZNF561-216ENST00000483768 ATXN8OSP0DMR3 200 aa8.73□□□□□ -1.01
ZNF561-216ENST00000483768 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
ZNF561-216ENST00000483768 POTEHQ6S545 545 aa8.65□□□□□ -1.02
ZNF561-216ENST00000483768 OSCARQ8IYS5 282 aa8.62□□□□□ -1.03
ZNF561-216ENST00000483768 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
ZNF561-216ENST00000483768 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
ZNF561-216ENST00000483768 FBLN2P98095 1184 aa8.57□□□□□ -1.04
ZNF561-216ENST00000483768 AKT1S1Q96B36 256 aa8.55□□□□□ -1.04
ZNF561-216ENST00000483768 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
ZNF561-216ENST00000483768 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
ZNF561-216ENST00000483768 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
ZNF561-216ENST00000483768 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 SPDYE2Q495Y8 402 aa8.44□□□□□ -1.06
ZNF561-216ENST00000483768 PITPNM1O00562 1244 aa8.4□□□□□ -1.06
ZNF561-216ENST00000483768 ZNF692Q9BU19 519 aaPredicted RBP8.4□□□□□ -1.06
ZNF561-216ENST00000483768 PIP4P2Q8N4L2 257 aa8.34□□□□□ -1.07
ZNF561-216ENST00000483768 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
ZNF561-216ENST00000483768 SSUH2Q9Y2M2 353 aa8.32□□□□□ -1.08
ZNF561-216ENST00000483768 SPDYE1Q8NFV5 336 aaPredicted RBP8.3□□□□□ -1.08
ZNF561-216ENST00000483768 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF561-216ENST00000483768 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
ZNF561-216ENST00000483768 HAX1O00165 279 aa8.22□□□□□ -1.09
ZNF561-216ENST00000483768 PRKAR2AP13861 404 aaKnown RBP8.2□□□□□ -1.1
ZNF561-216ENST00000483768 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
ZNF561-216ENST00000483768 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
ZNF561-216ENST00000483768 CHADLQ6NUI6 762 aa8.14□□□□□ -1.11
ZNF561-216ENST00000483768 SP7Q8TDD2 431 aaPredicted RBP8.14□□□□□ -1.11
ZNF561-216ENST00000483768 EVX2Q03828 476 aa8.08□□□□□ -1.12
ZNF561-216ENST00000483768 STAG3Q9UJ98 1225 aa8.04□□□□□ -1.12
ZNF561-216ENST00000483768 C19orf67A6NJJ6 358 aa8.01□□□□□ -1.13
ZNF561-216ENST00000483768 FARP1Q9Y4F1 1045 aaPredicted RBP8□□□□□ -1.13
ZNF561-216ENST00000483768 CREBZFQ9NS37 354 aa7.96□□□□□ -1.14
ZNF561-216ENST00000483768 CD44P16070 742 aaKnown RBP7.95□□□□□ -1.14
ZNF561-216ENST00000483768 GABBR2O75899 941 aa7.9□□□□□ -1.14
ZNF561-216ENST00000483768 PROM2Q8N271 834 aa7.88□□□□□ -1.15
ZNF561-216ENST00000483768 ZRANB1Q9UGI0 708 aa7.86□□□□□ -1.15
ZNF561-216ENST00000483768 FKBP8Q14318 412 aa7.85□□□□□ -1.15
ZNF561-216ENST00000483768 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
ZNF561-216ENST00000483768 PAK3O75914 559 aaPredicted RBP7.82□□□□□ -1.16
ZNF561-216ENST00000483768 MNX1P50219 401 aaPredicted RBP7.8□□□□□ -1.16
ZNF561-216ENST00000483768 MIER1Q8N108 512 aa7.8□□□□□ -1.16
ZNF561-216ENST00000483768 ZNF579Q8NAF0 562 aaKnown RBP7.79□□□□□ -1.16
ZNF561-216ENST00000483768 PLEKHG5O94827 1062 aa7.77□□□□□ -1.17
ZNF561-216ENST00000483768 PHF12Q96QT6 1004 aa7.77□□□□□ -1.17
ZNF561-216ENST00000483768 PLCD3Q8N3E9 789 aa7.75□□□□□ -1.17
ZNF561-216ENST00000483768 CLCN6P51797 869 aa7.74□□□□□ -1.17
ZNF561-216ENST00000483768 DCBLD2Q96PD2 775 aa7.74□□□□□ -1.17
ZNF561-216ENST00000483768 TSPYL2Q9H2G4 693 aaPredicted RBP7.74□□□□□ -1.17
ZNF561-216ENST00000483768 GALR2O43603 387 aaPredicted RBP7.72□□□□□ -1.17
ZNF561-216ENST00000483768 POTEIP0CG38 1075 aa7.72□□□□□ -1.17
ZNF561-216ENST00000483768 LHX8Q68G74 356 aa7.66□□□□□ -1.18
ZNF561-216ENST00000483768 RASEFQ8IZ41 740 aa7.65□□□□□ -1.18
ZNF561-216ENST00000483768 MS4A3Q96HJ5 214 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms