RNA–Protein interactions for RNA: ENST00000493416.5

ABCD3-206, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 5

Gene ABCD3, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-206ENST00000493416 AEBP2Q6ZN18 517 aaPredicted RBP29.32■■■□□ 2.28
ABCD3-206ENST00000493416 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
ABCD3-206ENST00000493416 SENP3Q9H4L4 574 aaPredicted RBP25■■□□□ 1.59
ABCD3-206ENST00000493416 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
ABCD3-206ENST00000493416 FOXD1Q16676 465 aa23.35■■□□□ 1.33
ABCD3-206ENST00000493416 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
ABCD3-206ENST00000493416 MSH5O43196 834 aa21.89■■□□□ 1.09
ABCD3-206ENST00000493416 PIAS4Q8N2W9 510 aaPredicted RBP21.8■■□□□ 1.08
ABCD3-206ENST00000493416 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
ABCD3-206ENST00000493416 POTEDQ86YR6 584 aa21.68■■□□□ 1.06
ABCD3-206ENST00000493416 ADRA2BP18089 450 aa21.64■■□□□ 1.05
ABCD3-206ENST00000493416 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
ABCD3-206ENST00000493416 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
ABCD3-206ENST00000493416 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
ABCD3-206ENST00000493416 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
ABCD3-206ENST00000493416 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
ABCD3-206ENST00000493416 HOXD11P31277 338 aaPredicted RBP19■□□□□ 0.63
ABCD3-206ENST00000493416 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
ABCD3-206ENST00000493416 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
ABCD3-206ENST00000493416 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
ABCD3-206ENST00000493416 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
ABCD3-206ENST00000493416 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
ABCD3-206ENST00000493416 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
ABCD3-206ENST00000493416 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
ABCD3-206ENST00000493416 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
ABCD3-206ENST00000493416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
ABCD3-206ENST00000493416 KCNA4P22459 653 aa17.76■□□□□ 0.43
ABCD3-206ENST00000493416 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
ABCD3-206ENST00000493416 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
ABCD3-206ENST00000493416 CAPN15O75808 1086 aa17.53■□□□□ 0.4
ABCD3-206ENST00000493416 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
ABCD3-206ENST00000493416 DSG3P32926 999 aa17.43■□□□□ 0.38
ABCD3-206ENST00000493416 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
ABCD3-206ENST00000493416 APLP2Q06481 763 aa17.18■□□□□ 0.34
ABCD3-206ENST00000493416 ABCB7O75027 752 aa17.14■□□□□ 0.33
ABCD3-206ENST00000493416 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
ABCD3-206ENST00000493416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
ABCD3-206ENST00000493416 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
ABCD3-206ENST00000493416 SAMD1Q6SPF0 538 aaPredicted RBP17.04■□□□□ 0.32
ABCD3-206ENST00000493416 POTEHQ6S545 545 aa16.96■□□□□ 0.31
ABCD3-206ENST00000493416 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
ABCD3-206ENST00000493416 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
ABCD3-206ENST00000493416 POLA2Q14181 598 aa16.68■□□□□ 0.26
ABCD3-206ENST00000493416 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
ABCD3-206ENST00000493416 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
ABCD3-206ENST00000493416 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
ABCD3-206ENST00000493416 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
ABCD3-206ENST00000493416 ZBTB22O15209 634 aa16.34■□□□□ 0.21
ABCD3-206ENST00000493416 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
ABCD3-206ENST00000493416 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
ABCD3-206ENST00000493416 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
ABCD3-206ENST00000493416 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
ABCD3-206ENST00000493416 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
ABCD3-206ENST00000493416 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
ABCD3-206ENST00000493416 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
ABCD3-206ENST00000493416 FBLN2P98095 1184 aa15.86■□□□□ 0.13
ABCD3-206ENST00000493416 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
ABCD3-206ENST00000493416 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
ABCD3-206ENST00000493416 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
ABCD3-206ENST00000493416 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
ABCD3-206ENST00000493416 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
ABCD3-206ENST00000493416 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
ABCD3-206ENST00000493416 HAX1O00165 279 aa15.69■□□□□ 0.1
ABCD3-206ENST00000493416 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
ABCD3-206ENST00000493416 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
ABCD3-206ENST00000493416 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
ABCD3-206ENST00000493416 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
ABCD3-206ENST00000493416 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
ABCD3-206ENST00000493416 EVX2Q03828 476 aa15.48■□□□□ 0.07
ABCD3-206ENST00000493416 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
ABCD3-206ENST00000493416 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
ABCD3-206ENST00000493416 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
ABCD3-206ENST00000493416 C19orf67A6NJJ6 358 aa15.29■□□□□ 0.04
ABCD3-206ENST00000493416 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
ABCD3-206ENST00000493416 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
ABCD3-206ENST00000493416 GABBR2O75899 941 aa15.11■□□□□ 0.01
ABCD3-206ENST00000493416 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
ABCD3-206ENST00000493416 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
ABCD3-206ENST00000493416 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
ABCD3-206ENST00000493416 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
ABCD3-206ENST00000493416 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
ABCD3-206ENST00000493416 LHX8Q68G74 356 aa14.82□□□□□ -0.04
ABCD3-206ENST00000493416 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
ABCD3-206ENST00000493416 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
ABCD3-206ENST00000493416 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
ABCD3-206ENST00000493416 CLCN6P51797 869 aa14.74□□□□□ -0.05
ABCD3-206ENST00000493416 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
ABCD3-206ENST00000493416 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
ABCD3-206ENST00000493416 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
ABCD3-206ENST00000493416 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
ABCD3-206ENST00000493416 PHF12Q96QT6 1004 aa14.57□□□□□ -0.08
ABCD3-206ENST00000493416 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
ABCD3-206ENST00000493416 PROM2Q8N271 834 aa14.49□□□□□ -0.09
ABCD3-206ENST00000493416 MS4A3Q96HJ5 214 aa14.37□□□□□ -0.11
ABCD3-206ENST00000493416 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
ABCD3-206ENST00000493416 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
ABCD3-206ENST00000493416 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
ABCD3-206ENST00000493416 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
ABCD3-206ENST00000493416 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
ABCD3-206ENST00000493416 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms