Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 TRAPPC1-202ENST00000540486 759 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC060766.2-201ENST00000588235 334 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 MIR8075-201ENST00000614354 80 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC009053.4-201ENST00000614366 108 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AL591926.6-201ENST00000617375 415 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC8.87□□□□□ -0.99
SLC1A1P43005 Z98043.1-201ENST00000624123 339 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC078795.1-201ENST00000602342 3143 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 AL390728.4-201ENST00000421406 1465 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 EIF4BP4-201ENST00000441847 1780 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 RN7SKP133-201ENST00000364845 340 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 AL356273.2-201ENST00000413701 973 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC8.86□□□□□ -0.99
SLC1A1P43005 TMEM97P1-201ENST00000452969 451 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC8.86□□□□□ -0.99
SLC1A1P43005 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC8.86□□□□□ -0.99
SLC1A1P43005 AC009248.1-201ENST00000548155 735 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 MPPE1P1-201ENST00000557286 1076 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.86□□□□□ -0.99
SLC1A1P43005 MIR5008-201ENST00000584300 94 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AC096708.1-201ENST00000584419 658 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AC007161.2-201ENST00000604734 1109 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AC002470.1-201ENST00000610278 395 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 MIR6776-201ENST00000616678 59 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 AL139351.1-201ENST00000622092 320 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.86□□□□□ -0.99
SLC1A1P43005 ACTBP13-201ENST00000423971 3959 ntBASIC8.86□□□□□ -0.99
SLC1A1P43005 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 FMO9P-201ENST00000477875 1364 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SLC1A1P43005 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.86□□□□□ -0.99
SLC1A1P43005 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 TRIM53BP-201ENST00000532912 1720 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 AC008537.3-201ENST00000623128 1881 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
SLC1A1P43005 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SLC1A1P43005 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.85□□□□□ -0.99
SLC1A1P43005 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC8.85□□□□□ -0.99
SLC1A1P43005 GRPEL2P3-201ENST00000448626 640 ntBASIC8.85□□□□□ -0.99
SLC1A1P43005 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms