Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYL5-205ENST00000505477 584 ntTSL 3 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC104117.2-201ENST00000523735 515 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC015818.5-201ENST00000578659 356 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 MIR4450-201ENST00000583589 65 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC008592.5-201ENST00000607856 547 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC018926.2-201ENST00000611214 498 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 MIR8075-201ENST00000614354 80 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AC126474.1-201ENST00000623555 1293 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 RPL4P3-201ENST00000428881 1311 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 MFSD1P1-201ENST00000576210 1327 ntBASIC9.02□□□□□ -0.97
LMO3Q8TAP4 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
LMO3Q8TAP4 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC131935.2-201ENST00000623649 1371 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC120114.2-201ENST00000567795 2272 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SNORA73A-201ENST00000364938 206 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 STSP1-201ENST00000412493 1151 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 PSAT1P1-201ENST00000518968 1106 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 ANP32BP1-201ENST00000564205 1297 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC007614.2-201ENST00000569877 1851 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC091147.1-201ENST00000583290 510 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AL161725.1-211ENST00000592805 889 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 OR7E16P-201ENST00000592975 885 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC024580.1-201ENST00000623020 674 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 AC122688.4-201ENST00000623279 4394 ntBASIC9.01□□□□□ -0.97
LMO3Q8TAP4 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC9.01□□□□□ -0.97
LMO3Q8TAP4 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC9□□□□□ -0.97
LMO3Q8TAP4 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 EIF4BP2-201ENST00000416702 1794 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 C12orf54-201ENST00000314014 887 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
LMO3Q8TAP4 RNU1-8P-201ENST00000384328 165 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 FANCL-204ENST00000403676 849 ntTSL 3 BASIC9□□□□□ -0.97
LMO3Q8TAP4 GLRX3P2-201ENST00000405027 1038 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 AL136968.2-201ENST00000407959 354 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 RPL7P13-201ENST00000415103 741 ntBASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms