Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SDHD-203ENST00000526592 861 ntTSL 3 BASIC8.89□□□□□ -0.99
SLC1A1P43005 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC8.89□□□□□ -0.99
SLC1A1P43005 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 AC137800.1-202ENST00000562098 446 ntBASIC8.89□□□□□ -0.99
SLC1A1P43005 OR7E16P-201ENST00000592975 885 ntBASIC8.89□□□□□ -0.99
SLC1A1P43005 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 TRMT112P7-201ENST00000603133 367 ntBASIC8.89□□□□□ -0.99
SLC1A1P43005 AL358335.3-201ENST00000604678 327 ntBASIC8.89□□□□□ -0.99
SLC1A1P43005 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.89□□□□□ -0.99
SLC1A1P43005 AP002759.1-201ENST00000526840 1571 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SLC1A1P43005 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC8.89□□□□□ -0.99
SLC1A1P43005 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SLC1A1P43005 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
SLC1A1P43005 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.89□□□□□ -0.99
SLC1A1P43005 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SLC1A1P43005 SND1-IT1-201ENST00000623342 2481 ntBASIC8.89□□□□□ -0.99
SLC1A1P43005 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SLC1A1P43005 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SLC1A1P43005 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SLC1A1P43005 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 LETMD1-228ENST00000550929 1389 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 PRSS54-202ENST00000543437 1555 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 MIR25-201ENST00000384816 84 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SLC1A1P43005 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 IGKV1D-35-201ENST00000442736 271 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 AC242426.2-201ENST00000446956 795 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 AC091152.1-201ENST00000472109 838 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC044839.4-201ENST00000534128 469 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 FRG2JP-201ENST00000568299 832 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC010323.2-201ENST00000596405 594 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC111188.3-201ENST00000604663 307 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC8.88□□□□□ -0.99
SLC1A1P43005 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC092611.3-201ENST00000624858 718 ntBASIC8.88□□□□□ -0.99
SLC1A1P43005 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.88□□□□□ -0.99
SLC1A1P43005 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
SLC1A1P43005 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SLC1A1P43005 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC8.87□□□□□ -0.99
SLC1A1P43005 SNORA7.3-201ENST00000384186 139 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 RN7SKP169-201ENST00000411124 291 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC244034.1-201ENST00000428027 792 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SLC1A1P43005 RPSAP8-201ENST00000429844 889 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AL450311.1-201ENST00000434931 576 ntTSL 4 BASIC8.87□□□□□ -0.99
SLC1A1P43005 FAR2P3-205ENST00000447059 604 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AC092610.1-201ENST00000454916 373 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 AP001318.1-201ENST00000476981 321 ntBASIC8.87□□□□□ -0.99
SLC1A1P43005 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC8.87□□□□□ -0.99
SLC1A1P43005 LINC02160-201ENST00000503577 517 ntTSL 3 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms