Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 TDGF1P3-202ENST00000602699 2710 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AL109615.1-201ENST00000331979 455 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 OR51D1-201ENST00000357605 1124 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 RPS20P25-201ENST00000412447 352 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 AL591686.1-201ENST00000421878 766 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AKR1B1P1-201ENST00000429105 956 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 LINC01006-205ENST00000440711 336 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AP001999.3-201ENST00000529922 455 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 MIR3918-201ENST00000581555 93 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC023855.1-201ENST00000585899 359 ntTSL 4 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 G6PC-204ENST00000592383 987 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AL137002.1-201ENST00000600642 182 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 CR381653.1-205ENST00000623409 580 ntTSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AC011483.4-201ENST00000623621 585 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 AP001206.1-201ENST00000635554 720 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 ZNF565-201ENST00000304116 2023 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 AL008721.2-201ENST00000609475 3754 ntBASIC7.91□□□□□ -1.14
SNX18Q96RF0 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC009502.1-201ENST00000607654 1965 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC020658.3-201ENST00000568093 4028 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 RN7SKP10-201ENST00000364291 325 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 TRIM26BP-206ENST00000427723 753 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AL365356.2-201ENST00000441526 196 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 LDHAL6DP-201ENST00000513668 693 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 OR5G1P-201ENST00000525221 946 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 OR4C7P-201ENST00000533375 919 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 BRWD1P2-201ENST00000546823 340 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC034102.4-201ENST00000548595 434 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 LINC02152-201ENST00000566208 1281 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC015674.1-201ENST00000578482 267 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 RN7SL468P-201ENST00000582256 294 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC100843.3-201ENST00000591796 259 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC7.9□□□□□ -1.14
SNX18Q96RF0 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SNX18Q96RF0 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.9□□□□□ -1.14
SNX18Q96RF0 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.9□□□□□ -1.15
SNX18Q96RF0 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SNX18Q96RF0 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SNX18Q96RF0 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms