Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 U3.50-201ENST00000611947 228 ntBASIC7.93□□□□□ -1.14
SNX18Q96RF0 CDK2AP2P1-201ENST00000617479 328 ntBASIC7.93□□□□□ -1.14
SNX18Q96RF0 AC106872.12-201ENST00000622170 547 ntBASIC7.93□□□□□ -1.14
SNX18Q96RF0 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC7.93□□□□□ -1.14
SNX18Q96RF0 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 AC092999.1-201ENST00000624004 1924 ntBASIC7.93□□□□□ -1.14
SNX18Q96RF0 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC7.93□□□□□ -1.14
SNX18Q96RF0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
SNX18Q96RF0 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.93□□□□□ -1.14
SNX18Q96RF0 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.93□□□□□ -1.14
SNX18Q96RF0 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SNX18Q96RF0 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC009148.1-201ENST00000570148 2693 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 CCDC144B-201ENST00000285176 4310 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 TTC4P1-201ENST00000427137 1158 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AL109810.1-201ENST00000435008 495 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC011228.1-201ENST00000439027 757 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 HNRNPA3P2-201ENST00000451198 662 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC092610.1-201ENST00000454916 373 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 RN7SL761P-201ENST00000463259 278 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 RPL7AP8-201ENST00000481963 804 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC02116-201ENST00000509455 493 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC253576.1-201ENST00000511645 1156 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 MSRA-205ENST00000518255 674 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 IGLV3-29-201ENST00000520084 244 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 SDR16C6P-202ENST00000524136 955 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC026369.3-201ENST00000540226 586 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC004147.5-201ENST00000581727 536 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AP005202.3-201ENST00000582033 567 ntTSL 4 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 RN7SL731P-201ENST00000584329 293 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC112219.2-201ENST00000608390 532 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 uc_338.23-201ENST00000614169 164 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 PRSS3P3-202ENST00000618042 682 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 FTX_5.1-201ENST00000618701 218 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AL139351.1-201ENST00000622092 320 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 MIR6834-201ENST00000622807 81 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 LINC01835-203ENST00000639800 567 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC008985.1-201ENST00000624169 2239 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC127502.2-201ENST00000602663 2351 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC026464.2-201ENST00000567834 2421 ntBASIC7.92□□□□□ -1.14
SNX18Q96RF0 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.92□□□□□ -1.14
SNX18Q96RF0 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SNX18Q96RF0 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SNX18Q96RF0 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC7.91□□□□□ -1.14
SNX18Q96RF0 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms