Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TERF1P5-201ENST00000477545 1207 ntBASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 AC020907.5-201ENST00000624372 1936 ntBASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 MIR5787-201ENST00000611784 55 ntBASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA11Q9Y5H2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 MIR2861-201ENST00000636310 90 ntBASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA11Q9Y5H2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 AC016769.1-201ENST00000409132 1010 ntBASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA11Q9Y5H2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 AL591742.1-201ENST00000604433 565 ntBASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGA11Q9Y5H2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 FAM21FP-204ENST00000608637 956 ntBASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 AC013268.1-206ENST00000638368 961 ntBASIC19.67■□□□□ 0.74
PCDHGA11Q9Y5H2 AC112229.1-201ENST00000639295 961 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms