Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB1Q9Y5F3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 ESRRAP1-201ENST00000400596 1257 ntBASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 AL512625.2-201ENST00000417533 625 ntBASIC20.33■□□□□ 0.85
PCDHB1Q9Y5F3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB1Q9Y5F3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB1Q9Y5F3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHB1Q9Y5F3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB1Q9Y5F3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 MYC-209ENST00000641252 345 ntBASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 FP700111.2-201ENST00000619190 1892 ntBASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB1Q9Y5F3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB1Q9Y5F3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB1Q9Y5F3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms