Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
YIPF1Q9Y548 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 MTDHP1-201ENST00000605323 784 ntBASIC21.35■■□□□ 1.01
YIPF1Q9Y548 MIR2861-201ENST00000636310 90 ntBASIC21.35■■□□□ 1.01
YIPF1Q9Y548 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
YIPF1Q9Y548 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 KRT8P36-201ENST00000489121 1440 ntBASIC21.34■■□□□ 1.01
YIPF1Q9Y548 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
YIPF1Q9Y548 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 MIR718-201ENST00000390190 70 ntBASIC21.33■■□□□ 1.01
YIPF1Q9Y548 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
YIPF1Q9Y548 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
YIPF1Q9Y548 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.33■■□□□ 1
YIPF1Q9Y548 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
YIPF1Q9Y548 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.32■■□□□ 1
YIPF1Q9Y548 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.32■■□□□ 1
YIPF1Q9Y548 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.32■■□□□ 1
YIPF1Q9Y548 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.32■■□□□ 1
YIPF1Q9Y548 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.32■■□□□ 1
YIPF1Q9Y548 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.32■■□□□ 1
YIPF1Q9Y548 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
YIPF1Q9Y548 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
YIPF1Q9Y548 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.32■■□□□ 1
YIPF1Q9Y548 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 AL023875.1-201ENST00000640777 796 ntBASIC21.32■■□□□ 1
YIPF1Q9Y548 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.32■■□□□ 1
YIPF1Q9Y548 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
YIPF1Q9Y548 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
YIPF1Q9Y548 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.31■■□□□ 1
YIPF1Q9Y548 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms