Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 AC092865.7-201ENST00000641832 219 ntBASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.87■■□□□ 1.73
RTCBQ9Y3I0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 AL049597.2-201ENST00000565575 961 ntBASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 AC145285.6-201ENST00000604632 637 ntBASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 MIR6786-201ENST00000616843 113 ntBASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.86■■□□□ 1.73
RTCBQ9Y3I0 NBPF21P-201ENST00000425093 1451 ntBASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 AL590326.2-201ENST00000625139 305 ntBASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
RTCBQ9Y3I0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 AC073195.1-201ENST00000607241 877 ntBASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 AC005363.2-201ENST00000618631 242 ntBASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTCBQ9Y3I0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTCBQ9Y3I0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
RTCBQ9Y3I0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 RBM17P1-201ENST00000453646 1190 ntBASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RTCBQ9Y3I0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms