Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LSM2Q9Y333 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSM2Q9Y333 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSM2Q9Y333 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.08■□□□□ 0.49
LSM2Q9Y333 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.08■□□□□ 0.49
LSM2Q9Y333 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSM2Q9Y333 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
LSM2Q9Y333 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LSM2Q9Y333 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
LSM2Q9Y333 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LSM2Q9Y333 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.08■□□□□ 0.48
LSM2Q9Y333 AC053503.5-201ENST00000601508 636 ntBASIC18.08■□□□□ 0.48
LSM2Q9Y333 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.08■□□□□ 0.48
LSM2Q9Y333 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.08■□□□□ 0.48
LSM2Q9Y333 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM2Q9Y333 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM2Q9Y333 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM2Q9Y333 AC093503.3-201ENST00000624917 2352 ntBASIC18.06■□□□□ 0.48
LSM2Q9Y333 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.06■□□□□ 0.48
LSM2Q9Y333 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM2Q9Y333 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM2Q9Y333 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.05■□□□□ 0.48
LSM2Q9Y333 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.05■□□□□ 0.48
LSM2Q9Y333 RARRES2P11-201ENST00000635158 484 ntBASIC18.05■□□□□ 0.48
LSM2Q9Y333 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM2Q9Y333 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM2Q9Y333 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.05■□□□□ 0.48
LSM2Q9Y333 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM2Q9Y333 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LSM2Q9Y333 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LSM2Q9Y333 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 Z82202.1-201ENST00000623446 1880 ntBASIC18.04■□□□□ 0.48
LSM2Q9Y333 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM2Q9Y333 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM2Q9Y333 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM2Q9Y333 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM2Q9Y333 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM2Q9Y333 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms