Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC007322.1-201ENST00000426983 750 ntBASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 FAM21FP-204ENST00000608637 956 ntBASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 AC080038.1-201ENST00000611274 1154 ntBASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 FP700111.2-201ENST00000619190 1892 ntBASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 AC068338.2-201ENST00000563278 1430 ntBASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA9Q9UGM1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA9Q9UGM1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 AC073111.5-205ENST00000641717 521 ntBASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA9Q9UGM1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 AC016405.3-201ENST00000607710 860 ntBASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA9Q9UGM1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA9Q9UGM1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA9Q9UGM1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA9Q9UGM1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms