Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX1-2Q9UD57 BX005040.4-201ENST00000637145 1518 ntBASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 AP000997.3-201ENST00000623333 2250 ntBASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 TMEM179-206ENST00000616017 1645 ntBASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX1-2Q9UD57 AC133637.1-201ENST00000624115 1537 ntBASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 AC011484.1-201ENST00000377652 1995 ntBASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 RNF126P1-201ENST00000567452 1320 ntBASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX1-2Q9UD57 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 AL691432.2-201ENST00000607222 2038 ntBASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 AC068587.7-201ENST00000641602 218 ntBASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 AL032819.2-201ENST00000624543 2162 ntBASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX1-2Q9UD57 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NKX1-2Q9UD57 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 U85056.1-201ENST00000616429 682 ntBASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX1-2Q9UD57 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX1-2Q9UD57 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms