Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
FAM53CQ9NYF3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 FZD10-202ENST00000539839 3282 ntBASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.85■□□□□ 0.93
FAM53CQ9NYF3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
FAM53CQ9NYF3 AP006587.3-201ENST00000525742 1516 ntBASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FAM53CQ9NYF3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
FAM53CQ9NYF3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.82■□□□□ 0.92
FAM53CQ9NYF3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
FAM53CQ9NYF3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms