Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PARPBPQ9NWS1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 AL109923.1-201ENST00000618799 583 ntBASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 AC005229.4-201ENST00000610085 2198 ntBASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 AC027702.1-201ENST00000563810 1770 ntBASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PARPBPQ9NWS1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 AC006128.1-201ENST00000624704 1661 ntBASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 ID1-201ENST00000376105 1233 ntBASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 TSPY6P-201ENST00000448518 926 ntBASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PARPBPQ9NWS1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 CYP21A1P-202ENST00000354927 1481 ntBASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 KRT18P68-201ENST00000392293 1000 ntBASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 AC093787.1-201ENST00000450396 207 ntBASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 PLK5-205ENST00000642079 1969 ntBASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.15■□□□□ 0.5
PARPBPQ9NWS1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PARPBPQ9NWS1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.14■□□□□ 0.5
PARPBPQ9NWS1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PARPBPQ9NWS1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 CYP2T3P-201ENST00000601990 817 ntBASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 AL589743.5-201ENST00000616611 1050 ntBASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PARPBPQ9NWS1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms