Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 GABARAPL3-202ENST00000624044 1851 ntBASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 AL512625.2-201ENST00000417533 625 ntBASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 AC133552.2-202ENST00000575694 574 ntBASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 AL356652.1-201ENST00000615962 565 ntBASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 AC092720.2-201ENST00000602388 1665 ntBASIC18.73■□□□□ 0.59
UBQLN4Q9NRR5 AC020907.5-201ENST00000624372 1936 ntBASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBQLN4Q9NRR5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 LINC01521-201ENST00000504184 1943 ntBASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 LINC01006-201ENST00000333319 2292 ntBASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBQLN4Q9NRR5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 AC010980.2-201ENST00000587099 1412 ntBASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
UBQLN4Q9NRR5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 MIR663A-201ENST00000385250 93 ntBASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 KRT18P68-201ENST00000392293 1000 ntBASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 CROCCP5-201ENST00000436658 830 ntBASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
UBQLN4Q9NRR5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms