Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.84■■□□□ 1.41
RTN4Q9NQC3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 AL499627.2-201ENST00000606283 725 ntBASIC23.83■■□□□ 1.41
RTN4Q9NQC3 MIR4787-201ENST00000607364 84 ntBASIC23.83■■□□□ 1.41
RTN4Q9NQC3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.83■■□□□ 1.41
RTN4Q9NQC3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTN4Q9NQC3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTN4Q9NQC3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTN4Q9NQC3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RTN4Q9NQC3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 AC010997.5-201ENST00000609182 354 ntBASIC23.81■■□□□ 1.4
RTN4Q9NQC3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTN4Q9NQC3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN4Q9NQC3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.79■■□□□ 1.4
RTN4Q9NQC3 SSR1P1-201ENST00000407630 814 ntBASIC23.79■■□□□ 1.4
RTN4Q9NQC3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms