Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 AC091799.1-201ENST00000422823 811 ntBASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC52A3Q9NQ40 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 AC098818.2-201ENST00000564925 2320 ntBASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SLC52A3Q9NQ40 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 TMEM179-206ENST00000616017 1645 ntBASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 AL020996.1-203ENST00000536896 2307 ntBASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 BX119927.1-201ENST00000636596 1552 ntBASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC52A3Q9NQ40 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 DPP3P2-201ENST00000416030 1696 ntBASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 AC120498.10-201ENST00000621827 505 ntBASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC52A3Q9NQ40 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLC52A3Q9NQ40 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 TREX1-205ENST00000625293 1783 ntBASIC19.27■□□□□ 0.67
SLC52A3Q9NQ40 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L2-201ENST00000561772 1275 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 AC104187.1-201ENST00000607510 612 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 AC243732.1-201ENST00000612648 864 ntBASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
SLC52A3Q9NQ40 DUX4L6-201ENST00000626483 1275 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms