Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 AC092437.1-201ENST00000624794 1048 ntBASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEUROD4Q9HD90 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 NTF6G-201ENST00000591094 616 ntBASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NEUROD4Q9HD90 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 KRT18P11-201ENST00000435214 1283 ntBASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEUROD4Q9HD90 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEUROD4Q9HD90 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEUROD4Q9HD90 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms