Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLK4Q9HAZ1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 TERF1P5-201ENST00000477545 1207 ntBASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 AC007322.4-201ENST00000509611 723 ntBASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 AC231657.2-201ENST00000624556 255 ntBASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK4Q9HAZ1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AL162412.1-201ENST00000567129 965 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AC080038.1-201ENST00000611274 1154 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AC013268.1-206ENST00000638368 961 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AC112229.1-201ENST00000639295 961 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 RBM17P2-201ENST00000616397 1405 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 AL020996.1-203ENST00000536896 2307 ntBASIC19.73■□□□□ 0.75
CLK4Q9HAZ1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 AC004911.1-201ENST00000416316 871 ntBASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 DUX4L16-201ENST00000555130 1264 ntBASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK4Q9HAZ1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK4Q9HAZ1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK4Q9HAZ1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms