Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AP003097.1-201ENST00000530657 1135 ntBASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AC007952.6-201ENST00000573168 2673 ntBASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 AC003957.1-201ENST00000625108 2673 ntBASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POLR1BQ9H9Y6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 LSM12P1-201ENST00000411836 588 ntBASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 AC073648.6-201ENST00000641589 218 ntBASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POLR1BQ9H9Y6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR1BQ9H9Y6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 AC244015.2-201ENST00000616358 1861 ntBASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR1BQ9H9Y6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 AL391422.3-201ENST00000603791 2761 ntBASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR1BQ9H9Y6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR1BQ9H9Y6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms