Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.3■□□□□ 0.68
NANOGQ9H9S0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NANOGQ9H9S0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 PBX2P1-201ENST00000493219 1291 ntBASIC19.29■□□□□ 0.68
NANOGQ9H9S0 AP001330.3-201ENST00000520123 633 ntBASIC19.29■□□□□ 0.68
NANOGQ9H9S0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 AL158211.5-201ENST00000623583 2518 ntBASIC19.29■□□□□ 0.68
NANOGQ9H9S0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 AC008406.3-201ENST00000620001 1374 ntBASIC19.29■□□□□ 0.68
NANOGQ9H9S0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NANOGQ9H9S0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NANOGQ9H9S0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 EDA-201ENST00000338901 1233 ntBASIC19.27■□□□□ 0.68
NANOGQ9H9S0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 AC245052.3-201ENST00000450182 901 ntBASIC19.27■□□□□ 0.68
NANOGQ9H9S0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.27■□□□□ 0.68
NANOGQ9H9S0 RASA4CP-201ENST00000424092 1398 ntBASIC19.27■□□□□ 0.68
NANOGQ9H9S0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGQ9H9S0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGQ9H9S0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.27■□□□□ 0.67
NANOGQ9H9S0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NANOGQ9H9S0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 KRT16P2-201ENST00000414673 1423 ntBASIC19.26■□□□□ 0.67
NANOGQ9H9S0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 AC096631.2-201ENST00000436136 790 ntBASIC19.26■□□□□ 0.67
NANOGQ9H9S0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 AC106739.1-201ENST00000617035 715 ntBASIC19.26■□□□□ 0.67
NANOGQ9H9S0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 AC116050.2-201ENST00000612102 1779 ntBASIC19.26■□□□□ 0.67
NANOGQ9H9S0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
NANOGQ9H9S0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NANOGQ9H9S0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms