Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 AP005212.1-201ENST00000581547 1997 ntBASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC68Q9H2F9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 AC016769.1-201ENST00000409132 1010 ntBASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC68Q9H2F9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC68Q9H2F9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC68Q9H2F9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 KRT18P5-201ENST00000436075 1291 ntBASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC68Q9H2F9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 AC020907.5-201ENST00000624372 1936 ntBASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC68Q9H2F9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms