Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 TERF1P5-201ENST00000477545 1207 ntBASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM54Q9BYV2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM54Q9BYV2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 AP005212.1-201ENST00000581547 1997 ntBASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM54Q9BYV2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 AL162430.1-201ENST00000480705 870 ntBASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 AL591742.1-201ENST00000604433 565 ntBASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM54Q9BYV2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 AC013268.1-206ENST00000638368 961 ntBASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 AC112229.1-201ENST00000639295 961 ntBASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM54Q9BYV2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM54Q9BYV2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM54Q9BYV2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM54Q9BYV2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM54Q9BYV2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM54Q9BYV2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms