Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 AL121603.2-201ENST00000557373 2117 ntBASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 AC142086.2-201ENST00000569753 217 ntBASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCM2Q9BSQ5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 KRT17P1-201ENST00000399211 1546 ntBASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 AC105020.6-201ENST00000621523 1217 ntBASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 SLC25A24-204ENST00000569674 2357 ntBASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
CCM2Q9BSQ5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 AL355802.2-201ENST00000402069 882 ntBASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 AC073210.2-201ENST00000430369 194 ntBASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 AC092118.2-201ENST00000613495 667 ntBASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCM2Q9BSQ5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCM2Q9BSQ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCM2Q9BSQ5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCM2Q9BSQ5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.02■□□□□ 0.79
CCM2Q9BSQ5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.02■□□□□ 0.79
CCM2Q9BSQ5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 AC133041.1-202ENST00000642053 222 ntBASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.01■□□□□ 0.79
CCM2Q9BSQ5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2Q9BSQ5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCM2Q9BSQ5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2Q9BSQ5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms