Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
ABCA3Q99758 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
ABCA3Q99758 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC27.45■■□□□ 1.99
ABCA3Q99758 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
ABCA3Q99758 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC27.45■■□□□ 1.99
ABCA3Q99758 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.99
ABCA3Q99758 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA3Q99758 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.45■■□□□ 1.98
ABCA3Q99758 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA3Q99758 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC27.44■■□□□ 1.98
ABCA3Q99758 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC27.44■■□□□ 1.98
ABCA3Q99758 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA3Q99758 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA3Q99758 LINC01568-207ENST00000641790 1380 ntBASIC27.44■■□□□ 1.98
ABCA3Q99758 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA3Q99758 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
ABCA3Q99758 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
ABCA3Q99758 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
ABCA3Q99758 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA3Q99758 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC27.44■■□□□ 1.98
ABCA3Q99758 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC27.44■■□□□ 1.98
ABCA3Q99758 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA3Q99758 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA3Q99758 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
ABCA3Q99758 MIR1238-201ENST00000408483 83 ntBASIC27.43■■□□□ 1.98
ABCA3Q99758 NIFKP9-201ENST00000419265 221 ntBASIC27.43■■□□□ 1.98
ABCA3Q99758 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC27.43■■□□□ 1.98
ABCA3Q99758 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC27.43■■□□□ 1.98
ABCA3Q99758 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC27.43■■□□□ 1.98
ABCA3Q99758 AL590326.2-201ENST00000625139 305 ntBASIC27.43■■□□□ 1.98
ABCA3Q99758 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA3Q99758 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC27.43■■□□□ 1.98
ABCA3Q99758 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.42■■□□□ 1.98
ABCA3Q99758 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC27.42■■□□□ 1.98
ABCA3Q99758 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC27.42■■□□□ 1.98
ABCA3Q99758 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
ABCA3Q99758 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC27.42■■□□□ 1.98
ABCA3Q99758 NTF6B-201ENST00000591913 560 ntBASIC27.42■■□□□ 1.98
ABCA3Q99758 AC073195.1-201ENST00000607241 877 ntBASIC27.42■■□□□ 1.98
ABCA3Q99758 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA3Q99758 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.42■■□□□ 1.98
ABCA3Q99758 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA3Q99758 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
ABCA3Q99758 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA3Q99758 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
ABCA3Q99758 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 LTBR-211ENST00000543190 785 ntTSL 3 BASIC27.41■■□□□ 1.98
ABCA3Q99758 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC27.41■■□□□ 1.98
ABCA3Q99758 AC005363.2-201ENST00000618631 242 ntBASIC27.41■■□□□ 1.98
ABCA3Q99758 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
ABCA3Q99758 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCA3Q99758 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA3Q99758 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA3Q99758 AC116562.2-201ENST00000507042 360 ntBASIC27.41■■□□□ 1.98
ABCA3Q99758 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA3Q99758 AC006011.2-201ENST00000621313 1158 ntBASIC27.41■■□□□ 1.98
ABCA3Q99758 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCA3Q99758 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.4■■□□□ 1.98
ABCA3Q99758 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC27.4■■□□□ 1.98
ABCA3Q99758 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCA3Q99758 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA3Q99758 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.39■■□□□ 1.98
ABCA3Q99758 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCA3Q99758 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCA3Q99758 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
ABCA3Q99758 CFL2-205ENST00000555765 632 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCA3Q99758 WWOX-216ENST00000569818 525 ntBASIC27.39■■□□□ 1.98
ABCA3Q99758 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA3Q99758 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCA3Q99758 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
ABCA3Q99758 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC27.39■■□□□ 1.97
ABCA3Q99758 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
ABCA3Q99758 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.39■■□□□ 1.97
ABCA3Q99758 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC27.38■■□□□ 1.97
ABCA3Q99758 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCA3Q99758 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
ABCA3Q99758 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ABCA3Q99758 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCA3Q99758 KRT16P1-201ENST00000399124 1418 ntBASIC27.38■■□□□ 1.97
ABCA3Q99758 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
ABCA3Q99758 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms