Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.56□□□□□ -0.24
LITAFQ99732 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.56□□□□□ -0.24
LITAFQ99732 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
LITAFQ99732 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
LITAFQ99732 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.56□□□□□ -0.24
LITAFQ99732 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.56□□□□□ -0.24
LITAFQ99732 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.56□□□□□ -0.24
LITAFQ99732 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LITAFQ99732 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.56□□□□□ -0.24
LITAFQ99732 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LITAFQ99732 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 AC010525.1-201ENST00000585559 441 ntBASIC13.55□□□□□ -0.24
LITAFQ99732 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
LITAFQ99732 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
LITAFQ99732 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LITAFQ99732 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.55□□□□□ -0.24
LITAFQ99732 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.55□□□□□ -0.24
LITAFQ99732 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LITAFQ99732 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.54□□□□□ -0.24
LITAFQ99732 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.54□□□□□ -0.24
LITAFQ99732 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.54□□□□□ -0.24
LITAFQ99732 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LITAFQ99732 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13.54□□□□□ -0.24
LITAFQ99732 AL117332.1-201ENST00000622628 974 ntBASIC13.54□□□□□ -0.24
LITAFQ99732 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LITAFQ99732 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LITAFQ99732 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LITAFQ99732 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LITAFQ99732 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
LITAFQ99732 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.54□□□□□ -0.24
LITAFQ99732 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.53□□□□□ -0.24
LITAFQ99732 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.53□□□□□ -0.24
LITAFQ99732 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 AC004987.1-201ENST00000428627 508 ntBASIC13.53□□□□□ -0.24
LITAFQ99732 ATP5G2P3-201ENST00000429083 425 ntBASIC13.53□□□□□ -0.24
LITAFQ99732 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LITAFQ99732 AC092028.1-203ENST00000608262 953 ntBASIC13.53□□□□□ -0.24
LITAFQ99732 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LITAFQ99732 AC055733.4-201ENST00000638462 1354 ntBASIC13.53□□□□□ -0.24
LITAFQ99732 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.53□□□□□ -0.24
LITAFQ99732 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LITAFQ99732 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms