Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 KRT18P57-201ENST00000443599 1254 ntBASIC18.53■□□□□ 0.56
SPENQ96T58 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 RARRES2P10-201ENST00000564312 460 ntBASIC18.53■□□□□ 0.56
SPENQ96T58 AL135905.2-201ENST00000584934 1404 ntBASIC18.53■□□□□ 0.56
SPENQ96T58 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 CYP2D8P-201ENST00000433633 1490 ntBASIC18.52■□□□□ 0.56
SPENQ96T58 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 KRT18P68-201ENST00000392293 1000 ntBASIC18.52■□□□□ 0.56
SPENQ96T58 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.52■□□□□ 0.56
SPENQ96T58 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 AC120498.8-201ENST00000614275 531 ntBASIC18.52■□□□□ 0.56
SPENQ96T58 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SPENQ96T58 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.52■□□□□ 0.56
SPENQ96T58 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SPENQ96T58 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.52■□□□□ 0.56
SPENQ96T58 KRT17P2-201ENST00000300992 1314 ntBASIC18.52■□□□□ 0.56
SPENQ96T58 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.52■□□□□ 0.56
SPENQ96T58 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPENQ96T58 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.52■□□□□ 0.55
SPENQ96T58 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.51■□□□□ 0.55
SPENQ96T58 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.51■□□□□ 0.55
SPENQ96T58 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.51■□□□□ 0.55
SPENQ96T58 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.51■□□□□ 0.55
SPENQ96T58 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SPENQ96T58 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.51■□□□□ 0.55
SPENQ96T58 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.51■□□□□ 0.55
SPENQ96T58 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.51■□□□□ 0.55
SPENQ96T58 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SPENQ96T58 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPENQ96T58 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.51■□□□□ 0.55
SPENQ96T58 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SPENQ96T58 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.5■□□□□ 0.55
SPENQ96T58 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPENQ96T58 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.5■□□□□ 0.55
SPENQ96T58 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPENQ96T58 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.5■□□□□ 0.55
SPENQ96T58 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.5■□□□□ 0.55
SPENQ96T58 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPENQ96T58 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPENQ96T58 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
SPENQ96T58 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPENQ96T58 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.49■□□□□ 0.55
SPENQ96T58 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.49■□□□□ 0.55
SPENQ96T58 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SPENQ96T58 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.49■□□□□ 0.55
SPENQ96T58 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.49■□□□□ 0.55
SPENQ96T58 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.49■□□□□ 0.55
SPENQ96T58 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
SPENQ96T58 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPENQ96T58 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 CDV3P1-201ENST00000471403 739 ntBASIC18.48■□□□□ 0.55
SPENQ96T58 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SPENQ96T58 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.48■□□□□ 0.55
SPENQ96T58 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPENQ96T58 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms